Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944824.1_cds_XP_016487524.1_78248
CDS Infomation

[gene=LOC107807616] [db_xref=GeneID:107807616] [protein=pentatricopeptide repeat-containing protein At2g46050, mitochondrial-like] [protein_id=XP_016487524.1] [location=complement(33358..35214)] [gbkey=CDS]
Sequence

ATGATTATTACTACCAAATACCGCTACATTCCAATTCCAATCATTTCCTTTAACCAGCAG
TTATTATTTCTAACGACCACTGCCGCCACCATTAGTTCACCTTTAGCTAGAGTAGAAGCT
TCAGTTCCTACTGTTAAGCTTACCCATTATAATGATTCAAGTAAATCCCACACTTGTATT
TCCAATGCCCTTAAAATTTCAGCAAAAAGGGGCAATTTTGATGAAGGTAAACTCATACAC
GCAAATATAATTAAGTTGGGTATGACTAGCGTGCTTTCCCTGGGAAACCAGCTCTTGCAT
GTTTATGTAAAATGCAAAGAGCTTGCTGATGCATGCAAGCTGTTCGATGAAATGTGCGTT
AGAAATATTGTAACTTGGAATACGTTGATATGTGGTTTGAGGTATTCTACGGAGCATTTT
AATGCAAATATTCATCTGGGGTTCCGTTATTTCAAGCAAATGTTGATGGAATCGGTGCCT
CCTGATTGCATTTCTTTCTGTGGGTTGCTCCGACTGTGTCTGGAGTTAAAGGATGGTGTT
TGGTTGGGTAAGGAGTTACATTGTGCAATTGTGAAGCTGGGATATGATCAAAGTTGTTTT
CTTGGTGCCAATCTTGTTGATCTGTATGCAAAGTTTGGGTTGGTTGGAGAGGCTAGGTGT
GTTCTTGATGGGGTTTTGGCGCGTGATTTGGTGTTATGGAATGTTATGATTTCTTGCTAT
GTACTGAATGGTTTGGGTGACGAGGCTTTCTGTTTATTCAATTTGATGAGATTTGAGGGG
TTTGAGGGGGATGAGTTTACATTTGCTAGTCTACTTAATTCCTGCGCGAGTTTGGGGTTT
TATGACTTAGGTAGGCAGATACAAGGACTTGCCATTAAAATTTGCCTTAACATGGATGTG
GTGGTTGAAAGTGCACTTGTTGATATGTATGCCAAGAATGAACATATAACCGATGCTCGC
AAGGTTTTTGACGCGATGGCCTTCAGAAATGTGGTCTCTTGGAATACTATTATTGTAGGT
TATGGACGCCGTGGAGATGGGAAGGAAGCTGTTGACCTTCTGAAAAGGATGTTAAGAGAG
GATTTTGTTCCTGACGAACTCACTTTGGCTAGTGTCCTTAGTTCATGTGGTAACTTAGCG
ATGGCCCCTGAAGTTATACAAGTACATGCTTATGCAGTAAAATATGTATGCTCAAATTCT
TTATCAATTGGAAACGCATTGATAAATGCATACTCAAAGTGTGGTAGTATTGTTCATGCT
TACCAGTCCTTCAGCTCAATAAAAGCACCAGATCTTGTGTCATGGACCTCAATGATTGGA
GCTTATGCATCTCACGGTTTTCCAAAGGAAGCTATTCAACTTTTTGACAAAATGTTGGTA
AATGGTGTGAAGCCAGATAGAATTGTATTTCTAGAGGTTCTCTCTGCATGTAGCCATGGT
GGTCTTTTTTGTAAAGGGATGCAGTATTTCCGTTTGATGACTAATTTCTACCAAATTATG
CCAAGCTCAGAACACTATACCTGTCTCGTAGATCTTTTAGGACGATTAGGCCTTCTGAAT
GAGGCTTATGAAGTTGTAAACTCAATGCCAGCTGAATCCAAAGCAGATTCCCTGAAGGCT
TTCATTGGCTCTTGTAATATCCATGGAAATATGAATTTGGCAAAATGGGCAGCAGAAAAG
CTTTTTGTTATAGATCCGAATGATACTGCTACTTACGTCCTTATGTCAAACCTGTATGCC
TCTGATAGTAATTGGCTTGATGCAGCCTTGATCTGGAAAATGGCAAGAGAGAGGTTGCAT
AAGAAGTCACCAGGCTGTAGCGTGGAAATTGCTGGTGGAATTAACAGATTAGCATGA

Peptide Sequence

PEP ID

XP_016487524.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g46050, mitochondrial-like [Nicotiana tabacum]
Sequence

MIITTKYRYIPIPIISFNQQLLFLTTTAATISSPLARVEASVPTVKLTHYNDSSKSHTCI
SNALKISAKRGNFDEGKLIHANIIKLGMTSVLSLGNQLLHVYVKCKELADACKLFDEMCV
RNIVTWNTLICGLRYSTEHFNANIHLGFRYFKQMLMESVPPDCISFCGLLRLCLELKDGV
WLGKELHCAIVKLGYDQSCFLGANLVDLYAKFGLVGEARCVLDGVLARDLVLWNVMISCY
VLNGLGDEAFCLFNLMRFEGFEGDEFTFASLLNSCASLGFYDLGRQIQGLAIKICLNMDV
VVESALVDMYAKNEHITDARKVFDAMAFRNVVSWNTIIVGYGRRGDGKEAVDLLKRMLRE
DFVPDELTLASVLSSCGNLAMAPEVIQVHAYAVKYVCSNSLSIGNALINAYSKCGSIVHA
YQSFSSIKAPDLVSWTSMIGAYASHGFPKEAIQLFDKMLVNGVKPDRIVFLEVLSACSHG
GLFCKGMQYFRLMTNFYQIMPSSEHYTCLVDLLGRLGLLNEAYEVVNSMPAESKADSLKA
FIGSCNIHGNMNLAKWAAEKLFVIDPNDTATYVLMSNLYASDSNWLDAALIWKMARERLH
KKSPGCSVEIAGGINRLA

Transcript Sequence

Gene sequence data has not been registered.